Can't find the citation, but remember gwern mentioning a study in one of his posts on replication that found that unintuitive findings tend to be both less replicable and more cited than intuitive ones.
Psychology is the field that is most hit with replication failures and has a slew of unintuitive results that turn out to be malpractice.
Psychology is also the field with a slew of unintuitive results that have been repeatedly replicated as correct. And what is "intuitive" anyways? What was extremely non-intuitive a century ago is common sense today.
So that's why I question the assertion. You're right that there are tons of replication failures, but whether intuition correlates with replicability way doesn't seem relevant. Especially when the point of so much research is to look for currently "non-intuitive" things, so of course that's where more replication issues might exist. It doesn't mean you should stop researching in that direction.
Psychology is the field that is most hit with replication failures and has a slew of unintuitive results that turn out to be malpractice.