Well unnecessary parentheses are often used to indicate a substitution has happened. E.g. in a topic I just taught I would write things like ∫_{y=0}^3 x dy = [xy]_{y=0}^3 = x(3) - x(0) = 3x. In context I think it's perfectly clear and a good notational choice.
edit: I suppose, what I'm trying to get at, perhaps too glibly, is that audience matters terribly much in mathematical writing. In the same way that Latin students don't start with Tacitus or Sallust, famous for their idiosyncratic grammar, math students shouldn't jump into the full context-dependent mess of the notation that experienced mathematicians use.
But I think we often thrown them in unintentionally because we're so used to it.