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Have you tried zimwiki? http://zim-wiki.org/

* It's basically a collection of text files

* Uses a markdown like syntax

* Has built in git support, so you can use git for versioning and looking at edit history.

* There is a gui that let's you edit in wysiwyg style * Can link between pages

* Written in python, so pretty much runs anywhere (no proper android/ios app still though)

* Todo item support

* most importantly, it's open source

* plugin system so you can add functionality easily

I pretty much use this as a knowledge management, daily task tracking system. It has a journal plugin that essentially creates a files for each day, similar to what you are doing.

I have it for both work and personal stuff.



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